Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp54Q8BL06 Gm42918-201ENSMUST00000199249 1580 ntBASIC20.39■□□□□ 0.85
Usp54Q8BL06 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp54Q8BL06 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Gm27772-201ENSMUST00000184900 187 ntBASIC20.38■□□□□ 0.85
Usp54Q8BL06 Gm38230-201ENSMUST00000193572 1159 ntBASIC20.38■□□□□ 0.85
Usp54Q8BL06 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp54Q8BL06 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC20.37■□□□□ 0.85
Usp54Q8BL06 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC20.37■□□□□ 0.85
Usp54Q8BL06 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp54Q8BL06 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Camk2g-217ENSMUST00000226630 1937 ntBASIC20.36■□□□□ 0.85
Usp54Q8BL06 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm15198-201ENSMUST00000117283 177 ntBASIC20.36■□□□□ 0.85
Usp54Q8BL06 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm24644-201ENSMUST00000157114 139 ntBASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm27731-201ENSMUST00000185192 107 ntBASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp54Q8BL06 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp54Q8BL06 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm11557-201ENSMUST00000120200 1008 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm8927-201ENSMUST00000181978 981 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm9728-201ENSMUST00000200197 1055 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm3222-201ENSMUST00000071282 990 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm10012-201ENSMUST00000078252 192 ntBASIC20.35■□□□□ 0.85
Usp54Q8BL06 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp54Q8BL06 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Mir1247-201ENSMUST00000116706 82 ntBASIC20.34■□□□□ 0.85
Usp54Q8BL06 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp54Q8BL06 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp54Q8BL06 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC20.34■□□□□ 0.85
Usp54Q8BL06 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms