Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Usp6nlQ80XC3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.05■□□□□ 0.16
Usp6nlQ80XC3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gm11478-201ENSMUST00000117851 599 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gm28760-201ENSMUST00000185995 736 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Usp6nlQ80XC3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gm18624-201ENSMUST00000220966 658 ntBASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Gm25857-201ENSMUST00000082788 129 ntBASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Usp6nlQ80XC3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms