Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Shd-206ENSMUST00000225145 998 ntBASIC13.92□□□□□ -0.18
Vrk1Q80X41 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.92□□□□□ -0.18
Vrk1Q80X41 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.92□□□□□ -0.18
Vrk1Q80X41 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.91□□□□□ -0.18
Vrk1Q80X41 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.91□□□□□ -0.18
Vrk1Q80X41 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.91□□□□□ -0.18
Vrk1Q80X41 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.91□□□□□ -0.18
Vrk1Q80X41 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.91□□□□□ -0.18
Vrk1Q80X41 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Gm45098-201ENSMUST00000207179 657 ntBASIC13.9□□□□□ -0.18
Vrk1Q80X41 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vrk1Q80X41 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.89□□□□□ -0.19
Vrk1Q80X41 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.89□□□□□ -0.19
Vrk1Q80X41 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vrk1Q80X41 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms