Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh8Q7TSK3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Pcdh8Q7TSK3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm15693-201ENSMUST00000120470 637 ntBASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh8Q7TSK3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gm27618-201ENSMUST00000183671 60 ntBASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh8Q7TSK3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh8Q7TSK3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdh8Q7TSK3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms