Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TwistnbQ78WZ7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm8097-201ENSMUST00000117903 829 ntBASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TwistnbQ78WZ7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TwistnbQ78WZ7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TwistnbQ78WZ7 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
TwistnbQ78WZ7 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Gm25016-201ENSMUST00000158399 131 ntBASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Gm27646-201ENSMUST00000183989 110 ntBASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TwistnbQ78WZ7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms