Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm38225-201ENSMUST00000194001 393 ntBASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm44855-201ENSMUST00000205725 362 ntBASIC15.13■□□□□ 0.01
Cspg5Q71M36 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.13■□□□□ 0.01
Cspg5Q71M36 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cspg5Q71M36 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.12■□□□□ 0.01
Cspg5Q71M36 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.12■□□□□ 0.01
Cspg5Q71M36 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cspg5Q71M36 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gm16215-201ENSMUST00000161990 637 ntBASIC15.11■□□□□ 0.01
Cspg5Q71M36 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gm7653-201ENSMUST00000214567 508 ntBASIC15.11■□□□□ 0.01
Cspg5Q71M36 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cspg5Q71M36 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms