Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ddx58Q6Q899 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx58Q6Q899 Syt7-204ENSMUST00000223586 1344 ntBASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ddx58Q6Q899 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Gm7730-201ENSMUST00000212486 454 ntBASIC17.98■□□□□ 0.47
Ddx58Q6Q899 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Gm9229-201ENSMUST00000222777 126 ntBASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.98■□□□□ 0.47
Ddx58Q6Q899 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ddx58Q6Q899 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gm4875-201ENSMUST00000118257 786 ntBASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gm14042-201ENSMUST00000120139 833 ntBASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gm2423-201ENSMUST00000074863 733 ntBASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ddx58Q6Q899 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.96■□□□□ 0.47
Ddx58Q6Q899 AC121804.3-201ENSMUST00000223420 295 ntBASIC17.96■□□□□ 0.47
Ddx58Q6Q899 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.96■□□□□ 0.47
Ddx58Q6Q899 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms