Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scaf4Q6PFF0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Scaf4Q6PFF0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Gm18246-201ENSMUST00000221023 728 ntBASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Scaf4Q6PFF0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.36□□□□□ -0.11
Scaf4Q6PFF0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms