Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tpm4Q6IRU2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gm21362-201ENSMUST00000194272 928 ntBASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Rps4l-201ENSMUST00000071745 943 ntBASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tpm4Q6IRU2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Birc2-201ENSMUST00000054878 378 ntBASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.3■□□□□ 0.2
Tpm4Q6IRU2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Tpm4Q6IRU2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm4Q6IRU2 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm4Q6IRU2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm4Q6IRU2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tpm4Q6IRU2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms