Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.88■□□□□ 0.29
Scn9aQ62205 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.88■□□□□ 0.29
Scn9aQ62205 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scn9aQ62205 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm43118-201ENSMUST00000199149 775 ntBASIC16.87■□□□□ 0.29
Scn9aQ62205 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm8598-201ENSMUST00000221184 836 ntBASIC16.87■□□□□ 0.29
Scn9aQ62205 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Scn9aQ62205 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scn9aQ62205 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.87■□□□□ 0.29
Scn9aQ62205 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm15236-201ENSMUST00000117309 379 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm13612-201ENSMUST00000119276 390 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.86■□□□□ 0.29
Scn9aQ62205 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm5370-201ENSMUST00000187187 574 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm15957-201ENSMUST00000118893 974 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm12882-201ENSMUST00000121696 517 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.86■□□□□ 0.29
Scn9aQ62205 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scn9aQ62205 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Scn9aQ62205 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.85■□□□□ 0.29
Scn9aQ62205 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.85■□□□□ 0.29
Scn9aQ62205 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Gm9823-201ENSMUST00000051212 327 ntBASIC16.85■□□□□ 0.29
Scn9aQ62205 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn9aQ62205 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn9aQ62205 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Gm22018-201ENSMUST00000104357 131 ntBASIC16.84■□□□□ 0.29
Scn9aQ62205 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Scn9aQ62205 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn9aQ62205 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms