Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Gli3Q61602 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.25■□□□□ 0.67
Gli3Q61602 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Gli3Q61602 Gm14028-201ENSMUST00000117434 479 ntBASIC19.25■□□□□ 0.67
Gli3Q61602 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC19.25■□□□□ 0.67
Gli3Q61602 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC19.25■□□□□ 0.67
Gli3Q61602 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gli3Q61602 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Gli3Q61602 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC19.25■□□□□ 0.67
Gli3Q61602 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC19.25■□□□□ 0.67
Gli3Q61602 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gli3Q61602 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.24■□□□□ 0.67
Gli3Q61602 Selenot-ps-201ENSMUST00000119098 593 ntBASIC19.24■□□□□ 0.67
Gli3Q61602 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC19.24■□□□□ 0.67
Gli3Q61602 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC19.24■□□□□ 0.67
Gli3Q61602 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC19.24■□□□□ 0.67
Gli3Q61602 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.24■□□□□ 0.67
Gli3Q61602 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gli3Q61602 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gli3Q61602 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Gli3Q61602 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC19.23■□□□□ 0.67
Gli3Q61602 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm14017-201ENSMUST00000121934 386 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC19.23■□□□□ 0.67
Gli3Q61602 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Gm42997-202ENSMUST00000200321 985 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gli3Q61602 AC154680.1-201ENSMUST00000224376 859 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC19.23■□□□□ 0.67
Gli3Q61602 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gli3Q61602 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Gli3Q61602 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm24830-201ENSMUST00000102024 166 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm25890-201ENSMUST00000177643 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Rnu1b2-201ENSMUST00000178073 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Rnu1b1-201ENSMUST00000178250 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Gm22614-201ENSMUST00000178300 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gli3Q61602 Gm22042-201ENSMUST00000082989 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Gm26232-201ENSMUST00000083360 166 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Gm24136-201ENSMUST00000083374 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Rnu1b6-201ENSMUST00000083839 166 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Gm26110-201ENSMUST00000083971 165 ntBASIC19.23■□□□□ 0.67
Gli3Q61602 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Gli3Q61602 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gli3Q61602 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.22■□□□□ 0.67
Gli3Q61602 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Gm12012-201ENSMUST00000118857 1066 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm12217-201ENSMUST00000118858 696 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm11964-201ENSMUST00000120982 444 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm16379-201ENSMUST00000161469 348 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm8762-201ENSMUST00000193486 339 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm37497-201ENSMUST00000195830 798 ntBASIC19.22■□□□□ 0.67
Gli3Q61602 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms