Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 AA414768-201ENSMUST00000121924 1257 ntBASIC13.69□□□□□ -0.22
Sox17Q61473 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Sox17Q61473 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.69□□□□□ -0.22
Sox17Q61473 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.69□□□□□ -0.22
Sox17Q61473 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.69□□□□□ -0.22
Sox17Q61473 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox17Q61473 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox17Q61473 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox17Q61473 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox17Q61473 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox17Q61473 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox17Q61473 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox17Q61473 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sox17Q61473 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox17Q61473 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.68□□□□□ -0.22
Sox17Q61473 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.68□□□□□ -0.22
Sox17Q61473 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.68□□□□□ -0.22
Sox17Q61473 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox17Q61473 Grk6-205ENSMUST00000224653 2976 ntBASIC13.68□□□□□ -0.22
Sox17Q61473 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.67□□□□□ -0.22
Sox17Q61473 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox17Q61473 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox17Q61473 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox17Q61473 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Sox17Q61473 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox17Q61473 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.67□□□□□ -0.22
Sox17Q61473 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox17Q61473 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.67□□□□□ -0.22
Sox17Q61473 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox17Q61473 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.66□□□□□ -0.22
Sox17Q61473 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox17Q61473 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox17Q61473 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox17Q61473 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms