Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.1■□□□□ 0.49
Irf9Q61179 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Gm2423-201ENSMUST00000074863 733 ntBASIC18.1■□□□□ 0.49
Irf9Q61179 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.1■□□□□ 0.49
Irf9Q61179 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Irf9Q61179 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Irf9Q61179 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.09■□□□□ 0.49
Irf9Q61179 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Irf9Q61179 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.09■□□□□ 0.49
Irf9Q61179 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Irf9Q61179 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Irf9Q61179 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Irf9Q61179 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Irf9Q61179 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Irf9Q61179 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Irf9Q61179 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Irf9Q61179 Syt7-204ENSMUST00000223586 1344 ntBASIC18.08■□□□□ 0.49
Irf9Q61179 Gm4875-201ENSMUST00000118257 786 ntBASIC18.08■□□□□ 0.48
Irf9Q61179 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Gm5866-201ENSMUST00000177881 973 ntBASIC18.08■□□□□ 0.48
Irf9Q61179 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.08■□□□□ 0.48
Irf9Q61179 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Irf9Q61179 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Irf9Q61179 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Irf9Q61179 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Irf9Q61179 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Irf9Q61179 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.07■□□□□ 0.48
Irf9Q61179 Gm14042-201ENSMUST00000120139 833 ntBASIC18.07■□□□□ 0.48
Irf9Q61179 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 Gm3436-201ENSMUST00000179930 840 ntBASIC18.07■□□□□ 0.48
Irf9Q61179 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Irf9Q61179 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.07■□□□□ 0.48
Irf9Q61179 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.07■□□□□ 0.48
Irf9Q61179 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Irf9Q61179 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Irf9Q61179 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.07■□□□□ 0.48
Irf9Q61179 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Irf9Q61179 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.06■□□□□ 0.48
Irf9Q61179 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.06■□□□□ 0.48
Irf9Q61179 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Gm7730-201ENSMUST00000212486 454 ntBASIC18.06■□□□□ 0.48
Irf9Q61179 Gm9229-201ENSMUST00000222777 126 ntBASIC18.06■□□□□ 0.48
Irf9Q61179 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.06■□□□□ 0.48
Irf9Q61179 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Irf9Q61179 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Irf9Q61179 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Irf9Q61179 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Irf9Q61179 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Irf9Q61179 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf9Q61179 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Irf9Q61179 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms