Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm37008-201ENSMUST00000195712 319 ntBASIC14.13□□□□□ -0.15
Col12a1Q60847 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Col12a1Q60847 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.13□□□□□ -0.15
Col12a1Q60847 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm18905-201ENSMUST00000205454 928 ntBASIC14.13□□□□□ -0.15
Col12a1Q60847 Olfr284-202ENSMUST00000206647 966 ntBASIC14.13□□□□□ -0.15
Col12a1Q60847 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Col12a1Q60847 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Col12a1Q60847 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Col12a1Q60847 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.12□□□□□ -0.15
Col12a1Q60847 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Proscos-202ENSMUST00000178990 666 ntBASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm5363-201ENSMUST00000211927 938 ntBASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.12□□□□□ -0.15
Col12a1Q60847 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.12□□□□□ -0.15
Col12a1Q60847 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm17376-201ENSMUST00000166016 84 ntBASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm37986-201ENSMUST00000193285 383 ntBASIC14.12□□□□□ -0.15
Col12a1Q60847 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Col12a1Q60847 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.11□□□□□ -0.15
Col12a1Q60847 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.11□□□□□ -0.15
Col12a1Q60847 Gm13786-201ENSMUST00000122371 333 ntBASIC14.11□□□□□ -0.15
Col12a1Q60847 Gm42627-201ENSMUST00000197347 224 ntBASIC14.11□□□□□ -0.15
Col12a1Q60847 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Col12a1Q60847 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Col12a1Q60847 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Gm13461-201ENSMUST00000120980 662 ntBASIC14.1□□□□□ -0.15
Col12a1Q60847 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Gm18935-201ENSMUST00000212692 664 ntBASIC14.1□□□□□ -0.15
Col12a1Q60847 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.1□□□□□ -0.15
Col12a1Q60847 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.1□□□□□ -0.15
Col12a1Q60847 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms