Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Gm13418-201ENSMUST00000119097 944 ntBASIC13.9□□□□□ -0.18
Nr1h4Q60641 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Gm18669-201ENSMUST00000216049 778 ntBASIC13.9□□□□□ -0.18
Nr1h4Q60641 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.9□□□□□ -0.18
Nr1h4Q60641 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nr1h4Q60641 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.9□□□□□ -0.19
Nr1h4Q60641 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Nr1h4Q60641 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nr1h4Q60641 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.89□□□□□ -0.19
Nr1h4Q60641 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.89□□□□□ -0.19
Nr1h4Q60641 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nr1h4Q60641 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Gm7222-201ENSMUST00000117512 906 ntBASIC13.88□□□□□ -0.19
Nr1h4Q60641 Gm11764-201ENSMUST00000120221 623 ntBASIC13.88□□□□□ -0.19
Nr1h4Q60641 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Nr1h4Q60641 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms