Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gm13464-201ENSMUST00000119418 935 ntBASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gm23547-201ENSMUST00000158210 271 ntBASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gm9726-201ENSMUST00000180321 678 ntBASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5d-4Q5R1F6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gm27301-201ENSMUST00000184012 127 ntBASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav5d-4Q5R1F6 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav5d-4Q5R1F6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Gm17968-201ENSMUST00000194902 784 ntBASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav5d-4Q5R1F6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms