Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav6-3Q5R1E6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav6-3Q5R1E6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm9182-201ENSMUST00000217829 639 ntBASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav6-3Q5R1E6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Gm16026-204ENSMUST00000162652 683 ntBASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms