Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Gm13436-201ENSMUST00000120418 567 ntBASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav3-3Q5R1C3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav3-3Q5R1C3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Gm13559-201ENSMUST00000120476 863 ntBASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav3-3Q5R1C3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav3-3Q5R1C3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms