Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps13aQ5H8C4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.18□□□□□ -0.14
Vps13aQ5H8C4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm13216-201ENSMUST00000117145 591 ntBASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm43138-201ENSMUST00000199123 708 ntBASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Celf4-206ENSMUST00000224553 1729 ntBASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps13aQ5H8C4 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm17795-201ENSMUST00000214505 757 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm15460-201ENSMUST00000118147 391 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm22331-201ENSMUST00000158066 136 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm29396-201ENSMUST00000185659 716 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm43818-201ENSMUST00000200605 466 ntBASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Gm6983-201ENSMUST00000214912 628 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms