Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2bQ56A07 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Scn2bQ56A07 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.42□□□□□ -0.1
Scn2bQ56A07 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.42□□□□□ -0.1
Scn2bQ56A07 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 AW822252-206ENSMUST00000208904 237 ntBASIC14.42□□□□□ -0.1
Scn2bQ56A07 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.42□□□□□ -0.1
Scn2bQ56A07 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Scn2bQ56A07 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.41□□□□□ -0.1
Scn2bQ56A07 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.41□□□□□ -0.1
Scn2bQ56A07 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn2bQ56A07 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.41□□□□□ -0.1
Scn2bQ56A07 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm8749-201ENSMUST00000117737 331 ntBASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm12260-201ENSMUST00000122447 411 ntBASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.4□□□□□ -0.1
Scn2bQ56A07 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.4□□□□□ -0.1
Scn2bQ56A07 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn2bQ56A07 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms