Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm42929-201ENSMUST00000198374 1286 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Olfr286-202ENSMUST00000205305 969 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm14730-201ENSMUST00000122378 1045 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm13316-201ENSMUST00000140537 691 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm7498-201ENSMUST00000203282 1084 ntBASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Herc2Q4U2R1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm12012-201ENSMUST00000118857 1066 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 AC166997.1-201ENSMUST00000225122 572 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm10782-202ENSMUST00000223775 1480 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm11400-201ENSMUST00000120853 1214 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm15276-201ENSMUST00000145953 498 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm25951-201ENSMUST00000175330 64 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm43275-201ENSMUST00000202053 1020 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm24420-201ENSMUST00000176676 59 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm8969-201ENSMUST00000199694 526 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.43□□□□□ -1.06
Herc2Q4U2R1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Herc2Q4U2R1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm29155-201ENSMUST00000185910 269 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm6458-201ENSMUST00000211573 635 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm12795-201ENSMUST00000117594 539 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm7666-201ENSMUST00000146631 819 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm6944-201ENSMUST00000182449 1006 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm37922-201ENSMUST00000195596 455 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 AC140375.1-201ENSMUST00000225421 694 ntBASIC8.42□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms