Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Gm28975-201ENSMUST00000186412 686 ntBASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Gm43452-201ENSMUST00000201873 991 ntBASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Tmem40Q4FJU9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gm16026-204ENSMUST00000162652 683 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Mir7684-201ENSMUST00000183858 60 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Tmem40Q4FJU9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Gm43767-201ENSMUST00000198933 381 ntBASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tmem40Q4FJU9 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms