Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim80Q3V061 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim80Q3V061 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.09■□□□□ 0.01
Trim80Q3V061 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim80Q3V061 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim80Q3V061 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim80Q3V061 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.09■□□□□ 0.01
Trim80Q3V061 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim80Q3V061 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim80Q3V061 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim80Q3V061 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Trim80Q3V061 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim80Q3V061 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trim80Q3V061 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim80Q3V061 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trim80Q3V061 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Trim80Q3V061 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Gm12497-201ENSMUST00000138778 237 ntBASIC15.08■□□□□ 0
Trim80Q3V061 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trim80Q3V061 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.08■□□□□ 0
Trim80Q3V061 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Gm27702-201ENSMUST00000184512 56 ntBASIC15.08■□□□□ 0
Trim80Q3V061 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.08■□□□□ 0
Trim80Q3V061 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.08■□□□□ 0
Trim80Q3V061 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.08■□□□□ 0
Trim80Q3V061 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.08■□□□□ 0
Trim80Q3V061 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim80Q3V061 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim80Q3V061 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trim80Q3V061 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.08■□□□□ 0
Trim80Q3V061 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim80Q3V061 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trim80Q3V061 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Gm13418-201ENSMUST00000119097 944 ntBASIC15.07■□□□□ 0
Trim80Q3V061 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.07■□□□□ 0
Trim80Q3V061 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.07■□□□□ 0
Trim80Q3V061 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.07■□□□□ 0
Trim80Q3V061 AV026068-213ENSMUST00000223675 1171 ntBASIC15.07■□□□□ 0
Trim80Q3V061 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Trim80Q3V061 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.07■□□□□ 0
Trim80Q3V061 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.07■□□□□ 0
Trim80Q3V061 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trim80Q3V061 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim80Q3V061 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trim80Q3V061 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trim80Q3V061 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.06■□□□□ 0
Trim80Q3V061 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.06■□□□□ 0
Trim80Q3V061 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trim80Q3V061 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms