Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Gm27704-201ENSMUST00000185094 107 ntBASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim40Q3UWA4 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Gm15358-201ENSMUST00000119249 520 ntBASIC13.68□□□□□ -0.22
Trim40Q3UWA4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Gm10499-201ENSMUST00000174094 934 ntBASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim40Q3UWA4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gm4459-201ENSMUST00000118750 468 ntBASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gm8655-201ENSMUST00000221159 852 ntBASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim40Q3UWA4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms