Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Arhgef40Q3UPH7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Mir3547-201ENSMUST00000175461 88 ntBASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Gm4971-201ENSMUST00000205991 1108 ntBASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Arhgef40Q3UPH7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Arhgef40Q3UPH7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Mir692-1-201ENSMUST00000102263 109 ntBASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Arhgef40Q3UPH7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Arhgef40Q3UPH7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 AC192088.1-201ENSMUST00000227561 301 ntBASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gm9109-201ENSMUST00000120254 1405 ntBASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Gm21038-201ENSMUST00000222205 1383 ntBASIC21.06■□□□□ 0.96
Arhgef40Q3UPH7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Arhgef40Q3UPH7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms