Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Puf60Q3UEB3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Mir6392-201ENSMUST00000184924 108 ntBASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 AC139580.1-202ENSMUST00000223574 928 ntBASIC19.9■□□□□ 0.78
Puf60Q3UEB3 AC238811.3-201ENSMUST00000225422 709 ntBASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Puf60Q3UEB3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Puf60Q3UEB3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Puf60Q3UEB3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Carlr-201ENSMUST00000181515 2574 ntBASIC19.89■□□□□ 0.77
Puf60Q3UEB3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Gm21470-201ENSMUST00000187680 696 ntBASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Puf60Q3UEB3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Gm11478-201ENSMUST00000117851 599 ntBASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Gm43433-201ENSMUST00000196573 481 ntBASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Gm19220-201ENSMUST00000222682 803 ntBASIC19.87■□□□□ 0.77
Puf60Q3UEB3 AC159006.1-201ENSMUST00000226396 258 ntBASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Puf60Q3UEB3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms