Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Gm9727-201ENSMUST00000161387 555 ntBASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.73□□□□□ -0.21
Brf2Q3UAW9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Brf2Q3UAW9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gm45747-201ENSMUST00000212203 999 ntBASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Brf2Q3UAW9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Brf2Q3UAW9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.71□□□□□ -0.22
Brf2Q3UAW9 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms