Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Q3KNL4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3KNL4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Q3KNL4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Q3KNL4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.34□□□□□ -0.11
Q3KNL4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.34□□□□□ -0.11
Q3KNL4 Gm4899-201ENSMUST00000178708 719 ntBASIC14.34□□□□□ -0.11
Q3KNL4 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Gm5864-201ENSMUST00000202263 970 ntBASIC14.34□□□□□ -0.11
Q3KNL4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Q3KNL4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.34□□□□□ -0.11
Q3KNL4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.33□□□□□ -0.11
Q3KNL4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Q3KNL4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.33□□□□□ -0.12
Q3KNL4 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Gm10819-201ENSMUST00000099988 561 ntBASIC14.33□□□□□ -0.12
Q3KNL4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Q3KNL4 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.33□□□□□ -0.12
Q3KNL4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Q3KNL4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Q3KNL4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Q3KNL4 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Q3KNL4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.32□□□□□ -0.12
Q3KNL4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Gm28659-201ENSMUST00000188013 759 ntBASIC14.32□□□□□ -0.12
Q3KNL4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Q3KNL4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Q3KNL4 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.32□□□□□ -0.12
Q3KNL4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms