Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna5Q2MKA5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Chrna5Q2MKA5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC17.23■□□□□ 0.35
Chrna5Q2MKA5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chrna5Q2MKA5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Mir692-1-201ENSMUST00000102263 109 ntBASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Gm21470-201ENSMUST00000187680 696 ntBASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chrna5Q2MKA5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.21■□□□□ 0.35
Chrna5Q2MKA5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.21■□□□□ 0.34
Chrna5Q2MKA5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chrna5Q2MKA5 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Gm45331-201ENSMUST00000209868 554 ntBASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.2■□□□□ 0.34
Chrna5Q2MKA5 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chrna5Q2MKA5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna5Q2MKA5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna5Q2MKA5 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna5Q2MKA5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chrna5Q2MKA5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms