Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.14□□□□□ -0.47
Tff1Q08423 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.14□□□□□ -0.47
Tff1Q08423 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tff1Q08423 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.14□□□□□ -0.47
Tff1Q08423 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.14□□□□□ -0.47
Tff1Q08423 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.14□□□□□ -0.47
Tff1Q08423 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Tff1Q08423 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Tff1Q08423 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Tff1Q08423 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.13□□□□□ -0.47
Tff1Q08423 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Tff1Q08423 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.13□□□□□ -0.47
Tff1Q08423 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.13□□□□□ -0.47
Tff1Q08423 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.13□□□□□ -0.47
Tff1Q08423 Gm14057-201ENSMUST00000120631 482 ntBASIC12.13□□□□□ -0.47
Tff1Q08423 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tff1Q08423 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.13□□□□□ -0.47
Tff1Q08423 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tff1Q08423 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.13□□□□□ -0.47
Tff1Q08423 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Tff1Q08423 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tff1Q08423 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Tff1Q08423 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Tff1Q08423 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tff1Q08423 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tff1Q08423 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tff1Q08423 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.12□□□□□ -0.47
Tff1Q08423 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.12□□□□□ -0.47
Tff1Q08423 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.12□□□□□ -0.47
Tff1Q08423 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.12□□□□□ -0.47
Tff1Q08423 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tff1Q08423 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tff1Q08423 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Tff1Q08423 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms