Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Ebf1Q07802 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ebf1Q07802 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ebf1Q07802 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ebf1Q07802 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.77□□□□□ -0.05
Ebf1Q07802 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.77□□□□□ -0.05
Ebf1Q07802 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Ebf1Q07802 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.77□□□□□ -0.05
Ebf1Q07802 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ebf1Q07802 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Syt7-204ENSMUST00000223586 1344 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Gm15487-201ENSMUST00000122373 465 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Gm27533-201ENSMUST00000183800 152 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ebf1Q07802 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.76□□□□□ -0.05
Ebf1Q07802 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.76□□□□□ -0.05
Ebf1Q07802 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ebf1Q07802 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm16215-201ENSMUST00000161990 637 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm43767-201ENSMUST00000198933 381 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm44344-201ENSMUST00000200287 129 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm7775-201ENSMUST00000218871 853 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.75□□□□□ -0.05
Ebf1Q07802 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ebf1Q07802 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Ebf1Q07802 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ebf1Q07802 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ebf1Q07802 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ebf1Q07802 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms