Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Hspg2Q05793 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Hspg2Q05793 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Hspg2Q05793 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Gm7783-201ENSMUST00000204795 781 ntBASIC10.52□□□□□ -0.73
Hspg2Q05793 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.52□□□□□ -0.73
Hspg2Q05793 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.52□□□□□ -0.73
Hspg2Q05793 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Hspg2Q05793 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Hspg2Q05793 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm12928-201ENSMUST00000117115 573 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm13464-201ENSMUST00000119418 935 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm18753-201ENSMUST00000201000 566 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Gm29787-201ENSMUST00000222129 849 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.51□□□□□ -0.73
Hspg2Q05793 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Hspg2Q05793 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Hspg2Q05793 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm12384-201ENSMUST00000119228 919 ntBASIC10.5□□□□□ -0.73
Hspg2Q05793 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm8598-201ENSMUST00000221184 836 ntBASIC10.5□□□□□ -0.73
Hspg2Q05793 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.5□□□□□ -0.73
Hspg2Q05793 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.5□□□□□ -0.73
Hspg2Q05793 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms