Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Col10a1Q05306 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.46□□□□□ -0.26
Col10a1Q05306 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col10a1Q05306 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.46□□□□□ -0.26
Col10a1Q05306 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col10a1Q05306 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.45□□□□□ -0.26
Col10a1Q05306 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col10a1Q05306 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col10a1Q05306 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.45□□□□□ -0.26
Col10a1Q05306 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.45□□□□□ -0.26
Col10a1Q05306 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.45□□□□□ -0.26
Col10a1Q05306 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col10a1Q05306 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.44□□□□□ -0.26
Col10a1Q05306 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.44□□□□□ -0.26
Col10a1Q05306 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.44□□□□□ -0.26
Col10a1Q05306 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.44□□□□□ -0.26
Col10a1Q05306 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col10a1Q05306 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col10a1Q05306 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.43□□□□□ -0.26
Col10a1Q05306 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Col10a1Q05306 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm23935-201ENSMUST00000102303 57 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm24270-201ENSMUST00000102326 57 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm24245-201ENSMUST00000157318 57 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm5479-201ENSMUST00000160578 435 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Gm18889-201ENSMUST00000174284 929 ntBASIC13.43□□□□□ -0.26
Col10a1Q05306 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms