Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Scn1bP97952 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Gm13836-201ENSMUST00000121159 501 ntBASIC13.34□□□□□ -0.27
Scn1bP97952 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Scn1bP97952 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn1bP97952 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn1bP97952 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1bP97952 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Scn1bP97952 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Scn1bP97952 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Scn1bP97952 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Scn1bP97952 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Scn1bP97952 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Scn1bP97952 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Gm6659-201ENSMUST00000174752 547 ntBASIC13.33□□□□□ -0.28
Scn1bP97952 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.33□□□□□ -0.28
Scn1bP97952 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn1bP97952 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn1bP97952 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn1bP97952 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1bP97952 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1bP97952 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.32□□□□□ -0.28
Scn1bP97952 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Scn1bP97952 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.32□□□□□ -0.28
Scn1bP97952 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.32□□□□□ -0.28
Scn1bP97952 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn1bP97952 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn1bP97952 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Scn1bP97952 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.32□□□□□ -0.28
Scn1bP97952 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Scn1bP97952 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Scn1bP97952 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn1bP97952 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn1bP97952 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn1bP97952 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn1bP97952 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms