Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Gm25948-201ENSMUST00000175334 112 ntBASIC13.8□□□□□ -0.2
Nkx3-2P97503 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nkx3-2P97503 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.79□□□□□ -0.2
Nkx3-2P97503 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Gm7774-201ENSMUST00000200064 533 ntBASIC13.79□□□□□ -0.2
Nkx3-2P97503 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.79□□□□□ -0.2
Nkx3-2P97503 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Nkx3-2P97503 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.78□□□□□ -0.2
Nkx3-2P97503 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm38225-201ENSMUST00000194001 393 ntBASIC13.78□□□□□ -0.2
Nkx3-2P97503 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.78□□□□□ -0.2
Nkx3-2P97503 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.78□□□□□ -0.2
Nkx3-2P97503 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nkx3-2P97503 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nkx3-2P97503 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Nkx3-2P97503 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms