Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkx2-3P97334 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Gm11478-201ENSMUST00000117851 599 ntBASIC18.21■□□□□ 0.51
Nkx2-3P97334 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Gm37444-201ENSMUST00000193605 439 ntBASIC18.21■□□□□ 0.51
Nkx2-3P97334 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.21■□□□□ 0.51
Nkx2-3P97334 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.21■□□□□ 0.51
Nkx2-3P97334 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkx2-3P97334 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Nkx2-3P97334 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.2■□□□□ 0.5
Nkx2-3P97334 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Nkx2-3P97334 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Gm5354-201ENSMUST00000182417 973 ntBASIC18.19■□□□□ 0.5
Nkx2-3P97334 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Gm5279-201ENSMUST00000199575 745 ntBASIC18.19■□□□□ 0.5
Nkx2-3P97334 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nkx2-3P97334 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.19■□□□□ 0.5
Nkx2-3P97334 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkx2-3P97334 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Gm15240-201ENSMUST00000118156 720 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Gm13829-201ENSMUST00000119600 138 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Mir7654-201ENSMUST00000185082 70 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.18■□□□□ 0.5
Nkx2-3P97334 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Gm44719-201ENSMUST00000206404 149 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.18■□□□□ 0.5
Nkx2-3P97334 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms