Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm11591-201ENSMUST00000120063 702 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
PrkdcP97313 Mir1943-201ENSMUST00000158276 73 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Gm27772-201ENSMUST00000184900 187 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.72□□□□□ -0.85
PrkdcP97313 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.72□□□□□ -0.85
PrkdcP97313 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.72□□□□□ -0.85
PrkdcP97313 Gm21769-201ENSMUST00000211922 111 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Gm18027-201ENSMUST00000218947 619 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Gm4935-201ENSMUST00000221316 1198 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
PrkdcP97313 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC9.72□□□□□ -0.85
PrkdcP97313 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
PrkdcP97313 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
PrkdcP97313 Gm23200-201ENSMUST00000104379 132 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Gm14130-201ENSMUST00000118417 987 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.72□□□□□ -0.85
PrkdcP97313 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Gm8099-201ENSMUST00000200510 742 ntBASIC9.72□□□□□ -0.85
PrkdcP97313 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
PrkdcP97313 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
PrkdcP97313 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm15957-201ENSMUST00000118893 974 ntBASIC9.71□□□□□ -0.85
PrkdcP97313 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.71□□□□□ -0.85
PrkdcP97313 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
PrkdcP97313 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.71□□□□□ -0.85
PrkdcP97313 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC9.71□□□□□ -0.85
PrkdcP97313 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
PrkdcP97313 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC9.71□□□□□ -0.85
PrkdcP97313 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.71□□□□□ -0.85
PrkdcP97313 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
PrkdcP97313 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
PrkdcP97313 Gm45412-201ENSMUST00000210217 2275 ntBASIC9.71□□□□□ -0.85
PrkdcP97313 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
PrkdcP97313 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.71□□□□□ -0.86
PrkdcP97313 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
PrkdcP97313 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Gm16479-201ENSMUST00000121706 932 ntBASIC9.71□□□□□ -0.86
PrkdcP97313 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
PrkdcP97313 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm38223-201ENSMUST00000194484 695 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 Morn2-202ENSMUST00000227729 656 ntBASIC9.7□□□□□ -0.86
PrkdcP97313 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC9.7□□□□□ -0.86
PrkdcP97313 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
PrkdcP97313 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms