Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.31□□□□□ -0.12
Lhx1P63006 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lhx1P63006 Gm27618-201ENSMUST00000183671 60 ntBASIC14.31□□□□□ -0.12
Lhx1P63006 Mir7023-201ENSMUST00000185093 64 ntBASIC14.31□□□□□ -0.12
Lhx1P63006 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.31□□□□□ -0.12
Lhx1P63006 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lhx1P63006 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
Lhx1P63006 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.31□□□□□ -0.12
Lhx1P63006 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Lhx1P63006 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.3□□□□□ -0.12
Lhx1P63006 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm6222-201ENSMUST00000120787 396 ntBASIC14.3□□□□□ -0.12
Lhx1P63006 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.3□□□□□ -0.12
Lhx1P63006 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.3□□□□□ -0.12
Lhx1P63006 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.3□□□□□ -0.12
Lhx1P63006 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lhx1P63006 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lhx1P63006 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.3□□□□□ -0.12
Lhx1P63006 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lhx1P63006 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Lhx1P63006 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Gm24543-201ENSMUST00000103867 82 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Lhx1P63006 Gm13453-201ENSMUST00000118708 357 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Gm14042-201ENSMUST00000120139 833 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Gm17837-201ENSMUST00000186435 985 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lhx1P63006 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Lhx1P63006 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.29□□□□□ -0.12
Lhx1P63006 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lhx1P63006 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.29□□□□□ -0.12
Lhx1P63006 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms