Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm22697-201ENSMUST00000175194 63 ntBASIC10.44□□□□□ -0.74
Cks1bP61025 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.44□□□□□ -0.74
Cks1bP61025 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.44□□□□□ -0.74
Cks1bP61025 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.44□□□□□ -0.74
Cks1bP61025 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
Cks1bP61025 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1bP61025 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.44□□□□□ -0.74
Cks1bP61025 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Cks1bP61025 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cks1bP61025 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cks1bP61025 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Cks1bP61025 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Gm7889-201ENSMUST00000185591 958 ntBASIC10.43□□□□□ -0.74
Cks1bP61025 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 CT009713.7-201ENSMUST00000224689 571 ntBASIC10.43□□□□□ -0.74
Cks1bP61025 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.43□□□□□ -0.74
Cks1bP61025 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.43□□□□□ -0.74
Cks1bP61025 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.43□□□□□ -0.74
Cks1bP61025 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cks1bP61025 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Cks1bP61025 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cks1bP61025 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.42□□□□□ -0.74
Cks1bP61025 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1bP61025 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Cks1bP61025 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.42□□□□□ -0.74
Cks1bP61025 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.42□□□□□ -0.74
Cks1bP61025 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.42□□□□□ -0.74
Cks1bP61025 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.42□□□□□ -0.74
Cks1bP61025 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cks1bP61025 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cks1bP61025 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cks1bP61025 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.42□□□□□ -0.74
Cks1bP61025 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms