Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.92□□□□□ -0.34
Sf3b6P59708 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.92□□□□□ -0.34
Sf3b6P59708 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.92□□□□□ -0.34
Sf3b6P59708 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.92□□□□□ -0.34
Sf3b6P59708 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Sf3b6P59708 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3b6P59708 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.91□□□□□ -0.34
Sf3b6P59708 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.91□□□□□ -0.34
Sf3b6P59708 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.91□□□□□ -0.34
Sf3b6P59708 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Sf3b6P59708 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3b6P59708 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.9□□□□□ -0.34
Sf3b6P59708 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.9□□□□□ -0.34
Sf3b6P59708 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm9726-201ENSMUST00000180321 678 ntBASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm5864-201ENSMUST00000202263 970 ntBASIC12.9□□□□□ -0.34
Sf3b6P59708 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.9□□□□□ -0.34
Sf3b6P59708 Rps4l-201ENSMUST00000071745 943 ntBASIC12.9□□□□□ -0.34
Sf3b6P59708 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms