Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.28■□□□□ 0.2
Tpm1P58771 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tpm1P58771 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tpm1P58771 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.28■□□□□ 0.2
Tpm1P58771 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Tpm1P58771 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tpm1P58771 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.27■□□□□ 0.2
Tpm1P58771 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tpm1P58771 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Tpm1P58771 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tpm1P58771 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.27■□□□□ 0.19
Tpm1P58771 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tpm1P58771 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.27■□□□□ 0.19
Tpm1P58771 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Tpm1P58771 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Tpm1P58771 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tpm1P58771 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tpm1P58771 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Tpm1P58771 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tpm1P58771 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Tpm1P58771 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.26■□□□□ 0.19
Tpm1P58771 Gm12644-201ENSMUST00000119935 606 ntBASIC16.26■□□□□ 0.19
Tpm1P58771 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.26■□□□□ 0.19
Tpm1P58771 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.26■□□□□ 0.19
Tpm1P58771 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Tpm1P58771 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.26■□□□□ 0.19
Tpm1P58771 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Tpm1P58771 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.25■□□□□ 0.19
Tpm1P58771 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.25■□□□□ 0.19
Tpm1P58771 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.25■□□□□ 0.19
Tpm1P58771 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Tpm1P58771 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Tpm1P58771 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms