Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.31■□□□□ 0.36
Irf5P56477 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.31■□□□□ 0.36
Irf5P56477 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.31■□□□□ 0.36
Irf5P56477 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.31■□□□□ 0.36
Irf5P56477 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Irf5P56477 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.31■□□□□ 0.36
Irf5P56477 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.31■□□□□ 0.36
Irf5P56477 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Irf5P56477 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.31■□□□□ 0.36
Irf5P56477 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.31■□□□□ 0.36
Irf5P56477 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Irf5P56477 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.3■□□□□ 0.36
Irf5P56477 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Gm43767-201ENSMUST00000198933 381 ntBASIC17.3■□□□□ 0.36
Irf5P56477 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Irf5P56477 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.3■□□□□ 0.36
Irf5P56477 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Irf5P56477 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Matn2-206ENSMUST00000228570 2798 ntBASIC17.29■□□□□ 0.36
Irf5P56477 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
Irf5P56477 Gm9824-201ENSMUST00000178707 561 ntBASIC17.29■□□□□ 0.36
Irf5P56477 Mir7684-201ENSMUST00000183858 60 ntBASIC17.29■□□□□ 0.36
Irf5P56477 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.29■□□□□ 0.36
Irf5P56477 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Irf5P56477 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Gm6415-201ENSMUST00000118488 348 ntBASIC17.28■□□□□ 0.36
Irf5P56477 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.28■□□□□ 0.36
Irf5P56477 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.28■□□□□ 0.36
Irf5P56477 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.28■□□□□ 0.36
Irf5P56477 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.28■□□□□ 0.36
Irf5P56477 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.28■□□□□ 0.36
Irf5P56477 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Irf5P56477 Gm27989-201ENSMUST00000184721 107 ntBASIC17.28■□□□□ 0.36
Irf5P56477 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.28■□□□□ 0.36
Irf5P56477 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Gm2423-201ENSMUST00000074863 733 ntBASIC17.28■□□□□ 0.36
Irf5P56477 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Irf5P56477 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Irf5P56477 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms