Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NcanP55066 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.22■□□□□ 0.03
NcanP55066 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Gm16177-201ENSMUST00000120728 718 ntBASIC15.22■□□□□ 0.03
NcanP55066 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.22■□□□□ 0.03
NcanP55066 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.22■□□□□ 0.03
NcanP55066 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.22■□□□□ 0.03
NcanP55066 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.22■□□□□ 0.03
NcanP55066 Gm5363-201ENSMUST00000211927 938 ntBASIC15.22■□□□□ 0.03
NcanP55066 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.22■□□□□ 0.03
NcanP55066 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.22■□□□□ 0.03
NcanP55066 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
NcanP55066 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.22■□□□□ 0.03
NcanP55066 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NcanP55066 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NcanP55066 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
NcanP55066 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NcanP55066 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.21■□□□□ 0.03
NcanP55066 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.21■□□□□ 0.03
NcanP55066 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.21■□□□□ 0.03
NcanP55066 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NcanP55066 Gm24644-201ENSMUST00000157114 139 ntBASIC15.21■□□□□ 0.03
NcanP55066 Gm10275-202ENSMUST00000168697 495 ntBASIC15.21■□□□□ 0.03
NcanP55066 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NcanP55066 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.21■□□□□ 0.03
NcanP55066 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.21■□□□□ 0.03
NcanP55066 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Gm10275-201ENSMUST00000092620 635 ntBASIC15.21■□□□□ 0.03
NcanP55066 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NcanP55066 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NcanP55066 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.21■□□□□ 0.02
NcanP55066 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.2■□□□□ 0.02
NcanP55066 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
NcanP55066 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Gm4804-201ENSMUST00000182234 999 ntBASIC15.2■□□□□ 0.02
NcanP55066 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.2■□□□□ 0.02
NcanP55066 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.2■□□□□ 0.02
NcanP55066 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NcanP55066 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NcanP55066 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
NcanP55066 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.19■□□□□ 0.02
NcanP55066 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.19■□□□□ 0.02
NcanP55066 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NcanP55066 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.19■□□□□ 0.02
NcanP55066 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.19■□□□□ 0.02
NcanP55066 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NcanP55066 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.19■□□□□ 0.02
NcanP55066 Gm19309-201ENSMUST00000218295 205 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms