Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.58□□□□□ -0.08
Fdft1P53798 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.58□□□□□ -0.08
Fdft1P53798 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Fdft1P53798 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Fdft1P53798 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Fdft1P53798 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Fdft1P53798 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Fdft1P53798 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Gm14140-201ENSMUST00000119999 995 ntBASIC14.57□□□□□ -0.08
Fdft1P53798 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.57□□□□□ -0.08
Fdft1P53798 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fdft1P53798 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fdft1P53798 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Fdft1P53798 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Fdft1P53798 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Fdft1P53798 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Fdft1P53798 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Fdft1P53798 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.56□□□□□ -0.08
Fdft1P53798 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.56□□□□□ -0.08
Fdft1P53798 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.56□□□□□ -0.08
Fdft1P53798 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Fdft1P53798 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Fdft1P53798 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.55□□□□□ -0.08
Fdft1P53798 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.55□□□□□ -0.08
Fdft1P53798 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Psmb5-202ENSMUST00000227257 622 ntBASIC14.55□□□□□ -0.08
Fdft1P53798 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Fdft1P53798 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Fdft1P53798 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.54□□□□□ -0.08
Fdft1P53798 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fdft1P53798 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Fdft1P53798 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms