Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sox3P53784 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.99□□□□□ -0.17
Sox3P53784 Gm12490-201ENSMUST00000120255 560 ntBASIC13.99□□□□□ -0.17
Sox3P53784 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sox3P53784 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.99□□□□□ -0.17
Sox3P53784 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox3P53784 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Gm25857-201ENSMUST00000082788 129 ntBASIC13.99□□□□□ -0.17
Sox3P53784 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.99□□□□□ -0.17
Sox3P53784 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.99□□□□□ -0.17
Sox3P53784 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sox3P53784 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.98□□□□□ -0.17
Sox3P53784 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Sox3P53784 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.98□□□□□ -0.17
Sox3P53784 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.98□□□□□ -0.17
Sox3P53784 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Sox3P53784 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.98□□□□□ -0.17
Sox3P53784 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.98□□□□□ -0.17
Sox3P53784 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sox3P53784 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sox3P53784 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sox3P53784 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.97□□□□□ -0.17
Sox3P53784 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sox3P53784 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.97□□□□□ -0.17
Sox3P53784 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Sox3P53784 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.97□□□□□ -0.17
Sox3P53784 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sox3P53784 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.96□□□□□ -0.17
Sox3P53784 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.96□□□□□ -0.17
Sox3P53784 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.96□□□□□ -0.17
Sox3P53784 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Gm13453-201ENSMUST00000118708 357 ntBASIC13.96□□□□□ -0.17
Sox3P53784 Gm15653-201ENSMUST00000119247 907 ntBASIC13.96□□□□□ -0.17
Sox3P53784 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sox3P53784 Gm17837-201ENSMUST00000186435 985 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms