Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.08■□□□□ 0.32
LtbrP50284 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LtbrP50284 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.07■□□□□ 0.32
LtbrP50284 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.07■□□□□ 0.32
LtbrP50284 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC17.07■□□□□ 0.32
LtbrP50284 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Gm12106-201ENSMUST00000116006 1200 ntBASIC17.07■□□□□ 0.32
LtbrP50284 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.07■□□□□ 0.32
LtbrP50284 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
LtbrP50284 Mir6392-201ENSMUST00000184924 108 ntBASIC17.07■□□□□ 0.32
LtbrP50284 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.07■□□□□ 0.32
LtbrP50284 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.07■□□□□ 0.32
LtbrP50284 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.07■□□□□ 0.32
LtbrP50284 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.07■□□□□ 0.32
LtbrP50284 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LtbrP50284 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LtbrP50284 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
LtbrP50284 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm4984-201ENSMUST00000115987 360 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Gm12957-201ENSMUST00000117835 377 ntBASIC17.06■□□□□ 0.32
LtbrP50284 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Gm37319-201ENSMUST00000193500 636 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LtbrP50284 Sybu-209ENSMUST00000228639 4113 ntBASIC17.06■□□□□ 0.32
LtbrP50284 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LtbrP50284 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LtbrP50284 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.05■□□□□ 0.32
LtbrP50284 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LtbrP50284 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC17.05■□□□□ 0.32
LtbrP50284 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.05■□□□□ 0.32
LtbrP50284 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.05■□□□□ 0.32
LtbrP50284 Gm21854-201ENSMUST00000179901 471 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Gm28760-201ENSMUST00000185995 736 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.05■□□□□ 0.32
LtbrP50284 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Gm18515-201ENSMUST00000219755 797 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Gm16476-201ENSMUST00000221544 139 ntBASIC17.05■□□□□ 0.32
LtbrP50284 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Gm9797-201ENSMUST00000052902 613 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LtbrP50284 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.05■□□□□ 0.32
LtbrP50284 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.05■□□□□ 0.32
LtbrP50284 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
LtbrP50284 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LtbrP50284 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms