Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Nkx2-1P50220 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Gm15358-201ENSMUST00000119249 520 ntBASIC12.1□□□□□ -0.47
Nkx2-1P50220 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Gm25745-201ENSMUST00000174945 133 ntBASIC12.1□□□□□ -0.47
Nkx2-1P50220 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.1□□□□□ -0.47
Nkx2-1P50220 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.1□□□□□ -0.47
Nkx2-1P50220 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.1□□□□□ -0.47
Nkx2-1P50220 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-1P50220 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm15165-201ENSMUST00000118140 502 ntBASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm4459-201ENSMUST00000118750 468 ntBASIC12.09□□□□□ -0.47
Nkx2-1P50220 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm10499-201ENSMUST00000174094 934 ntBASIC12.09□□□□□ -0.47
Nkx2-1P50220 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.09□□□□□ -0.47
Nkx2-1P50220 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-1P50220 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-1P50220 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-1P50220 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms