Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox2P48432 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sox2P48432 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Sox2P48432 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Sox2P48432 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox2P48432 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox2P48432 Gm18489-201ENSMUST00000172565 551 ntBASIC13.68□□□□□ -0.22
Sox2P48432 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox2P48432 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sox2P48432 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox2P48432 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox2P48432 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.67□□□□□ -0.22
Sox2P48432 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.67□□□□□ -0.22
Sox2P48432 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sox2P48432 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox2P48432 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox2P48432 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.67□□□□□ -0.22
Sox2P48432 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sox2P48432 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
Sox2P48432 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Sox2P48432 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox2P48432 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC13.66□□□□□ -0.22
Sox2P48432 Gm4535-201ENSMUST00000182274 558 ntBASIC13.66□□□□□ -0.22
Sox2P48432 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox2P48432 Gm10355-201ENSMUST00000097146 517 ntBASIC13.66□□□□□ -0.22
Sox2P48432 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.66□□□□□ -0.22
Sox2P48432 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox2P48432 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox2P48432 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox2P48432 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox2P48432 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sox2P48432 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox2P48432 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox2P48432 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox2P48432 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms