Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HttP42859 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC15.22■□□□□ 0.03
HttP42859 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.22■□□□□ 0.03
HttP42859 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HttP42859 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HttP42859 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.22■□□□□ 0.03
HttP42859 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HttP42859 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.22■□□□□ 0.03
HttP42859 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HttP42859 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.22■□□□□ 0.03
HttP42859 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.22■□□□□ 0.03
HttP42859 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.22■□□□□ 0.03
HttP42859 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HttP42859 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Gm6023-201ENSMUST00000118217 606 ntBASIC15.21■□□□□ 0.03
HttP42859 Gm18916-201ENSMUST00000198264 1246 ntBASIC15.21■□□□□ 0.03
HttP42859 Gm21769-201ENSMUST00000211922 111 ntBASIC15.21■□□□□ 0.03
HttP42859 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HttP42859 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Gm2991-201ENSMUST00000173338 480 ntBASIC15.21■□□□□ 0.03
HttP42859 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HttP42859 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HttP42859 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HttP42859 Gm8805-201ENSMUST00000117848 313 ntBASIC15.21■□□□□ 0.02
HttP42859 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HttP42859 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HttP42859 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HttP42859 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.2■□□□□ 0.02
HttP42859 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm20482-202ENSMUST00000174729 825 ntBASIC15.2■□□□□ 0.02
HttP42859 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
HttP42859 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.2■□□□□ 0.02
HttP42859 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.2■□□□□ 0.02
HttP42859 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.2■□□□□ 0.02
HttP42859 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.2■□□□□ 0.02
HttP42859 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HttP42859 Gm12203-201ENSMUST00000118235 598 ntBASIC15.19■□□□□ 0.02
HttP42859 Gm12241-201ENSMUST00000118330 726 ntBASIC15.19■□□□□ 0.02
HttP42859 Gm12209-201ENSMUST00000120089 596 ntBASIC15.19■□□□□ 0.02
HttP42859 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Mir5120-201ENSMUST00000175020 78 ntBASIC15.19■□□□□ 0.02
HttP42859 Gm42471-201ENSMUST00000201457 1865 ntBASIC15.19■□□□□ 0.02
HttP42859 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC15.19■□□□□ 0.02
HttP42859 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC15.19■□□□□ 0.02
HttP42859 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HttP42859 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms