Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.79□□□□□ -0.36
Upk2P38575 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Upk2P38575 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Upk2P38575 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upk2P38575 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Upk2P38575 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Gm14494-201ENSMUST00000118786 435 ntBASIC12.78□□□□□ -0.36
Upk2P38575 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.78□□□□□ -0.36
Upk2P38575 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk2P38575 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Gm37230-201ENSMUST00000194491 818 ntBASIC12.78□□□□□ -0.36
Upk2P38575 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.78□□□□□ -0.36
Upk2P38575 Gm6443-201ENSMUST00000203599 874 ntBASIC12.78□□□□□ -0.36
Upk2P38575 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Gm20553-201ENSMUST00000204205 844 ntBASIC12.78□□□□□ -0.36
Upk2P38575 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Upk2P38575 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.78□□□□□ -0.36
Upk2P38575 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.78□□□□□ -0.36
Upk2P38575 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Upk2P38575 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.77□□□□□ -0.36
Upk2P38575 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Upk2P38575 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Upk2P38575 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Upk2P38575 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Upk2P38575 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.77□□□□□ -0.37
Upk2P38575 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
Upk2P38575 Gm27920-201ENSMUST00000183953 96 ntBASIC12.77□□□□□ -0.37
Upk2P38575 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.77□□□□□ -0.37
Upk2P38575 AW822252-206ENSMUST00000208904 237 ntBASIC12.77□□□□□ -0.37
Upk2P38575 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Upk2P38575 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Upk2P38575 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.77□□□□□ -0.37
Upk2P38575 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Upk2P38575 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.77□□□□□ -0.37
Upk2P38575 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Upk2P38575 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Upk2P38575 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Upk2P38575 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Upk2P38575 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Upk2P38575 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms